PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G21350.1 Thioredoxin superfamily protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

plastid (Pubmed: 23198870 18431481 ) (supported by in-house exprements)

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G21350.5 11 Arabidopsis thaliana 2E-112 151 100 100 0 (0) C
AT1G21350.3 11 Arabidopsis thaliana 2E-112 151 100 100 196 (131) C
AT1G21350.4 11 Arabidopsis thaliana 1E-111 151 100 100 0 (0) S
Os07g15670.3 7 Oryza sativa 2E-84 147 78 89 24 (24) C
Os07g15670.1 7 Oryza sativa 2E-84 147 78 89 24 (24) C
Os07g15670.2 7 Oryza sativa 2E-84 147 78 89 24 (24) C
Zm00001eb097150_P001 agpv5 Zea mays 1E-85 147 80 89 2 (2) C
v1_GRMZM2G145895_P01 4a53 Zea mays 1E-85 147 80 89 62 (62) C
GRMZM2G145895_P01 3.21 Zea mays 1E-85 147 80 89 62 (62) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AhpC-TSA(1) Redoxin(1) Thioredoxin_2(1)
TargetP:	Secreted (Class 3 C0.009; M0.054; S0.903; _0.372)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	151 aa (-cTP 116)
Molecular Weight	17.08 kDA(-cTP )
PI	6.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
119	Detail								root [B. rapa]	plastid stroma
180_181	Detail								leaf [A. thaliana]	chloroplast stroma	clpr2-1
303	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
355	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
356	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
420	Detail								leaf [A. thaliana]	chloroplast stroma	clpR1-stop (EMS)
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1409	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	wild-type
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1413	Detail								leaf [A. thaliana]	total leaf tissue -114 rep1tR1	wild-type
1414	Detail								leaf [A. thaliana]	total leaf tissue -114 rep1tR2	wild-type
1416	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.2	clpr2-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1462	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 2)
1483	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1517	Detail								leaf [A. thaliana]		wild-type
1520	Detail								leaf [A. thaliana]		wild-type
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1945	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type
1985	Detail								leaf [A. thaliana]	plastid	wild-type
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1999	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2000	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2001	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2112	Detail								leaf [A. thaliana]	Stroma stroma	wt
2114	Detail								leaf [A. thaliana]	Stroma stroma	wt
2116	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2117	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2181	Detail								leaf [A. thaliana]	stroma Clp	ClpF x ClpS1
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2184	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2185	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2219	Detail								Total soluble [A. thaliana]	Total soluble proteins	cGEP strep
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
20423899(chloroplast)
21693672(wound-regulated leaf proteome (wt))

Comparative Proteomics Data

Expr*	Source	Tech.	Spot	PepSeq	ChargeState(z)	AreaRatio	Ambiguity	Tissue	Sample from
180_181	clpr2-1 cICAT - exp1 / wt cICAT - exp1	cICAT	8	EFGAVCTPEFFLYK + ICAT_l / EFGAVCTPEFFLYK + ICAT_h	2	10.09		leaf [A. thaliana]	chloroplast stroma