PPDB

The Plant Proteome Database

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AT1G21200.1   sequence-specific DNA binding transcription factor

Lab Annot. sequence-specific DNA binding transcription factors
Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G21200.2 11Arabidopsis thaliana04431001000 (0)_
AT1G76870.1 11Arabidopsis thaliana1E-14243456680 (0)_
AT1G76870.3 11Arabidopsis thaliana1E-14243456680 (0)_
Os12g06640.1 7Oryza sativa5E-10746044600 (0)C
Os12g06640.2 7Oryza sativa5E-10746044600 (0)C
Os11g06410.3 7Oryza sativa3E-9945042590 (0)_
Zm00001eb407690_P002 agpv5Zea mays8E-11045743590 (0)_
Zm00001eb407690_P001 agpv5Zea mays8E-11045743590 (0)_
GRMZM2G301122_P01 3.21Zea mays8E-11045743590 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Myb_DNA-bind_4(2) RNA_pol_Rpb5_N(2)
TargetP: Cytoplasm (Class 4 C0.155; M0.357; S0.017; _0.627)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 443 aa (-cTP 419)
Molecular Weight 50.93 kDA(-cTP )
PI 5.88(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help