PPDB

The Plant Proteome Database

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AT1G21190.1   Small nuclear ribonucleoprotein family protein

Lab Annot.
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G76860.1 11Arabidopsis thaliana2E-5897909518 (14)_
AT2G47640.2 11Arabidopsis thaliana3E-099030616 (6)_
AT2G47640.3 11Arabidopsis thaliana3E-099030616 (6)_
Os01g64690.1 7Oryza sativa1E-5489899815 (15)_
Os05g24970.2 7Oryza sativa2E-099030612 (2)_
Os05g24970.1 7Oryza sativa2E-099030612 (2)_
Zm00001eb146730_P001 agpv5Zea mays4E-579686950 (0)_
GRMZM6G768049_P01 3.21Zea mays4E-5796869539 (39)_
v1_AC155610.2_FGP009 4a53Zea mays3E-154175879 (9)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF150_C(1) Glutaredoxin(1) LSM(1)
TargetP: Cytoplasm (Class 2 C0.144; M0.147; S0.129; _0.831)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 97 aa (-cTP 80)
Molecular Weight 11.25 kDA(-cTP )
PI 4.78(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help