PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G21170.1   Exocyst complex component SEC5

Lab Annot. Exocyst complex component SEC5
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G21170.2 11Arabidopsis thaliana0109998980 (0)_
AT1G76850.1 11Arabidopsis thaliana01093808824 (24)_
Os04g34450.1 7Oryza sativa01121577326 (26)_
Os03g52770.1 7Oryza sativa5E-07150235213 (13)C
Zm00001eb083200_P003 agpv5Zea mays092152700 (0)M
Zm00001eb422350_P003 agpv5Zea mays076957740 (0)M
Zm00001eb083200_P001 agpv5Zea mays077156740 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Dor1(1) Ribosomal_60s(2) Sec5(1) Vps51(1)
TargetP: Cytoplasm (Class 3 C0.364; M0.035; S0.026; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1090 aa (-cTP 1039)
Molecular Weight 122.67 kDA(-cTP )
PI 5.63(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help