PPDB

PPDB	The Plant Proteome Database

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AT1G20920.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH42) (EMB1507)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20920.6 11 Arabidopsis thaliana 0 828 100 100 0 (0) _
AT1G20920.4 11 Arabidopsis thaliana 0 828 100 100 0 (0) _
AT1G20920.3 11 Arabidopsis thaliana 0 828 100 100 0 (0) _
Os08g06344.2 7 Oryza sativa 0 800 73 83 1 (1) _
Os08g06344.3 7 Oryza sativa 0 800 73 83 1 (1) _
Os08g06344.1 7 Oryza sativa 0 800 73 83 1 (1) _
GRMZM2G030659_P01 3.21 Zea mays 0 809 72 81 1 (1) _
Zm00001eb415650_P001 agpv5 Zea mays 0 809 72 81 0 (0) _
Zm00001eb415650_P002 agpv5 Zea mays 0 809 72 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) Helicase_C(1) PBP1_TM(2) ResIII(1)
TargetP:	Cytoplasm (Class 2 C0.121; M0.107; S0.097; _0.912)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	828 aa (-cTP 804)
Molecular Weight	90.94 kDA(-cTP )
PI	5.29(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data