PPDB

PPDB	The Plant Proteome Database

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AT1G20920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH42) (EMB1507)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20920.6 11 Arabidopsis thaliana 0 1166 100 100 0 (0) _
AT1G20920.4 11 Arabidopsis thaliana 0 1166 100 100 0 (0) _
AT1G20920.3 11 Arabidopsis thaliana 0 1166 100 100 0 (0) _
Os08g06344.2 7 Oryza sativa 0 919 68 78 1 (1) _
Os08g06344.3 7 Oryza sativa 0 919 68 78 1 (1) _
Os08g06344.1 7 Oryza sativa 0 919 68 78 1 (1) _
Zm00001eb415650_P002 agpv5 Zea mays 0 913 68 77 0 (0) _
GRMZM2G090869_P01 3.21 Zea mays 3E-134 540 44 62 0 (0) M
Zm00001eb396040_P002 agpv5 Zea mays 3E-134 540 44 62 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) Helicase_C(1) ResIII(1)
TargetP:	Cytoplasm (Class 2 C0.078; M0.128; S0.094; _0.923)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1166 aa (-cTP 1162)
Molecular Weight	133.03 kDA(-cTP )
PI	5.68(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data