PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G20900.1   Putative AT-hook DNA-binding family protein
Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G76500.1 11Arabidopsis thaliana9E-10030468740 (0)_
AT4G14465.1 11Arabidopsis thaliana5E-6022654690 (0)_
AT2G42940.1 11Arabidopsis thaliana8E-6016462780 (0)C
Os02g48320.2 7Oryza sativa3E-6031848560 (0)M
Os02g48320.1 7Oryza sativa3E-6031848560 (0)M
Os02g48320.3 7Oryza sativa3E-6031848560 (0)M
Zm00001eb381980_P001 agpv5Zea mays5E-6925955630 (0)_
Zm00001eb381980_P002 agpv5Zea mays5E-6925955630 (0)_
GRMZM2G024005_P01 3.21Zea mays5E-6925955630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NAM-associated(1) PCC(1) Spt20(1)
TargetP: Cytoplasm (Class 4 C0.031; M0.434; S0.005; _0.814)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 311 aa (-cTP 231)
Molecular Weight 31.84 kDA(-cTP )
PI 6.70(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help