PPDB

PPDB	The Plant Proteome Database

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AT1G20823.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G76410.1 11 Arabidopsis thaliana 4E-86 195 71 82 0 (0) _
AT2G17450.1 11 Arabidopsis thaliana 2E-50 163 54 61 0 (0) _
AT4G35480.1 11 Arabidopsis thaliana 5E-46 181 46 60 0 (0) _
Os02g46100.1 7 Oryza sativa 8E-43 176 51 63 0 (0) _
Os02g58540.1 7 Oryza sativa 6E-42 168 47 65 0 (0) _
Os04g49550.1 7 Oryza sativa 3E-38 190 43 57 0 (0) _
Zm00001eb250960_P001 agpv5 Zea mays 2E-48 175 49 68 0 (0) _
v1_GRMZM2G057789_P01 4a53 Zea mays 2E-48 175 49 68 0 (0) _
GRMZM2G057789_P01 3.21 Zea mays 2E-48 175 49 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(2) UPF0547(2) zf-ANAPC11(1) zf-C3HC
TargetP:	Cytoplasm (Class 1 C0.106; M0.030; S0.015; _0.912)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	197 aa (-cTP 119)
Molecular Weight	20.92 kDA(-cTP )
PI	6.87(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data