PPDB

 The Plant Proteome Database

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AT1G20816.1   outer envelope pore-like protein
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G76405.2 11Arabidopsis thaliana4E-101167788919 (11)_
AT1G76405.1 11Arabidopsis thaliana4E-295780890 (0)_
Os02g58550.2 7Oryza sativa8E-41185375324 (24)_
Os02g58550.1 7Oryza sativa8E-41185375324 (24)_
Zm00001eb259570_P001 agpv5Zea mays9E-4117339560 (0)M
v1_GRMZM2G124563_P01 4a53Zea mays9E-2714936529 (9)M
GRMZM2G124563_P01 3.21Zea mays9E-27149365210 (10)M

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cupin_8(1)
TargetP: Cytoplasm (Class 5 C0.103; M0.549; S0.040; _0.567)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 167 aa (-cTP 150)
Molecular Weight 19.78 kDA(-cTP )
PI 9.51(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help