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AT1G20810.1
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
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| Lab Annot. |
Isomerases - lumen
Mapman: 29.6 protein.folding |
| Curated Location |
thylakoid-peripheral-lumenal-side (Pubmed: 23198870 11719511 18431481 ) (supported by in-house exprements)
TAIR curated location: thylakoid lumen (sensu Viridiplantae)11719511 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
FKBP_C(1) |
| TargetP: |
Chloroplast (Class 4 C0.715; M0.415; S0.002; _0.026) |
| Predotar: |
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| Subcel. Location: |
Lumen |
| TM-HMM prediction: |
No |
| Aramemnon: |
1 TMs |
| TAT position: |
45 |
| Length |
232 aa (-cTP 165) (-lTP 161) |
| Molecular Weight |
25.53 kDA(-cTP 18.16)(-lTP 17.78) |
| PI |
9.35(-cTP 8.62)(-lTP 8.964) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 327 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 343 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 355 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 371 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 527 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt1) |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 544 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) <600 kDa (LMA) | wild-type |
| 875 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 876 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 1393 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 2) |
| 1400 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1402 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1404 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1413 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue -114 rep1tR1 | wild-type |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1432 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1532 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | clps (rep. 1) |
| 1534 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | clps (rep. 1) |
| 1766 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Met1-1 |
| 1830 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Col-0 Normal light |
| 1831 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Met1-1 Normal light |
| 1941 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1943 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1944 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1947 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2011 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2015 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2016 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2020 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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11719511(Thylakoid lumen proteome)
16923014(cold-stress responsive chloroplast)
18431481(chloroplast)
19995728(proplastid (Brassica napus))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
20423899(chloroplast)
19995723(chloroplast reference proteome)
21515685(GreenCut2)
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Comparative Proteomics Data
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