PPDB

PPDB	The Plant Proteome Database

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AT1G20780.1 senescence-associated E3 ubiquitin ligase 1

Lab Annot.

senescence-associated E3 ubiquitin ligase 1
Mapman: 29.5.11.2 protein.degradation.ubiquitin.E1; 33.3* development.senescence

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20780.2 11 Arabidopsis thaliana 0 801 100 100 0 (0) _
AT1G20780.3 11 Arabidopsis thaliana 0 801 100 100 0 (0) _
AT1G76390.1 11 Arabidopsis thaliana 0 807 77 85 3 (3) _
Os12g17900.1 7 Oryza sativa 0 797 58 76 22 (22) _
Os03g45420.1 7 Oryza sativa 0 809 50 70 0 (0) _
Os12g17880.1 7 Oryza sativa 0 782 46 64 0 (0) M
Zm00001eb190530_P001 agpv5 Zea mays 0 830 54 71 0 (0) _
GRMZM2G017852_P01 3.21 Zea mays 0 830 54 71 0 (0) _
v1_GRMZM2G017852_P01 4a53 Zea mays 0 830 54 71 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adaptin_N(4) Arm(8) Arm_2(3) Cnd1(2) CTNNBL(2) DUF3361(3) HEAT(3) HEAT_2(7) HEAT
TargetP:	Cytoplasm (Class 1 C0.112; M0.079; S0.052; _0.921)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	801 aa (-cTP 799)
Molecular Weight	88.38 kDA(-cTP )
PI	5.76(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data