PPDB

PPDB	The Plant Proteome Database

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AT1G20760.1 Calcium-binding EF hand family protein

Lab Annot.

calcium-binding EF hand protein
Mapman: 30.3 signalling.calcium

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G21630.3 11 Arabidopsis thaliana 0 1204 40 51 0 (0) _
AT1G21630.4 11 Arabidopsis thaliana 0 1234 39 50 0 (0) _
AT1G21630.1 11 Arabidopsis thaliana 0 1229 39 49 24 (16) _
Os03g03830.1 7 Oryza sativa 0 1156 43 52 19 (19) _
Os06g51250.1 7 Oryza sativa 7E-170 1225 35 48 30 (30) _
Os02g06340.1 7 Oryza sativa 4E-10 72 41 66 0 (0) _
GRMZM2G120975_P01 3.21 Zea mays 0 1134 43 53 6 (3) _
Zm00001eb402480_P002 agpv5 Zea mays 0 1134 43 53 0 (0) _
v1_GRMZM2G120975_P01 4a53 Zea mays 0 1134 43 53 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ALIX_LYPXL_bnd(1) EF-hand_1(4) EF-hand_4(2) EF-hand_5(2) EF-hand_6(4) EF-hand_7(
TargetP:	Cytoplasm (Class 2 C0.140; M0.113; S0.015; _0.856)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1019 aa (-cTP 945)
Molecular Weight	109.82 kDA(-cTP )
PI	4.96(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]
1576	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1577	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1581	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data