PPDB

 The Plant Proteome Database

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AT1G20720.1   RAD3-like DNA-binding helicase protein
Lab Annot. DEAD_2 domain
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G20720.2 11Arabidopsis thaliana01035991000 (0)_
AT1G20750.1 11Arabidopsis thaliana0104068750 (0)_
AT1G79950.5 11Arabidopsis thaliana2E-13581134510 (0)M
Os09g37920.1 7Oryza sativa0105347630 (0)_
Os01g40980.1 7Oryza sativa5E-12580134500 (0)_
Os01g40980.2 7Oryza sativa2E-12076634490 (0)_
Zm00001eb320860_P001 agpv5Zea mays078458740 (0)_
GRMZM2G107987_P02 3.21Zea mays064055700 (0)_
v1_GRMZM2G107987_P02 4a53Zea mays064055700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DEAD_2(2) DUF4230(2) HBB(1) Helicase_C_2(1) ResIII(2)
TargetP: Cytoplasm (Class 2 C0.111; M0.119; S0.028; _0.884)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1175 aa (-cTP 1160)
Molecular Weight 131.61 kDA(-cTP )
PI 8.03(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
541Detail       leaf [A. thaliana] stroma (FPLC) >1 MDa stromawild-type
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
640Detail       leaf [A. thaliana] plastid nucleoid wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help