PPDB

 The Plant Proteome Database

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AT1G20540.1   Transducin/WD40 repeat-like superfamily protein
Lab Annot. Transducin/WD40 repeat-like protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G76260.1 11Arabidopsis thaliana035086920 (0)_
AT2G16780.1 11Arabidopsis thaliana2E-1122025451 (1)_
AT4G35050.1 11Arabidopsis thaliana5E-1117126470 (0)_
Os08g44010.2 7Oryza sativa1E-17635166810 (0)M
Os08g44010.4 7Oryza sativa1E-17635166810 (0)M
Os08g44010.3 7Oryza sativa1E-17635166810 (0)M
GRMZM2G081538_P07 3.21Zea mays3E-17335164820 (0)M
Zm00001eb180420_P001 agpv5Zea mays3E-17335164820 (0)M
Zm00001eb180420_P006 agpv5Zea mays3E-17335164820 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF2415(1) eIF2A(1) WD40(6)
TargetP: Cytoplasm (Class 3 C0.049; M0.298; S0.070; _0.713)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 351 aa (-cTP 328)
Molecular Weight 39.04 kDA(-cTP )
PI 5.09(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to flower)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help