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AT1G20510.1
OPC-8:0 CoA ligase1
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| Lab Annot. |
At4CL9 - 4-coumarate--CoA ligase
Mapman: 16.2 secondary metabolism.phenylpropanoids |
| Curated Location |
peroxisome
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
AMP-binding(1) AMP-binding_C(1) |
| TargetP: |
Chloroplast (Class 3 C0.747; M0.215; S0.024; _0.052) |
| Predotar: |
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| Subcel. Location: |
Transmembrane |
| TM-HMM prediction: |
2 TMs |
| Aramemnon: |
2 TMs |
| TAT position: |
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| Length |
546 aa (-cTP 495) (-lTP 413) |
| Molecular Weight |
59.37 kDA(-cTP 53.80)(-lTP 45.10) |
| PI |
8.51(-cTP 7.74)(-lTP 8.235) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 324 | Detail | | | | | | | | leaf [A. thaliana] | cell wall enriched | wild-type |
| 371 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 1346 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 2) |
| 1347 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 3) |
| 1348 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 1) |
| 1350 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 3) |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1439 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 1) |
| 1440 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 2) |
| 1441 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 3) |
| 1442 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 1) |
| 1443 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 2) |
| 1448 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | abck2xabck3 (rep. 1) |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))
21533090(plasmodesmata-crude)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
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Comparative Proteomics Data
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