PPDB

The Plant Proteome Database

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AT1G20500.1   AMP-dependent synthetase and ligase family protein

Lab Annot.
Mapman: 16.2 secondary metabolism.phenylpropanoids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38120.1 11Arabidopsis thaliana055372831 (1)C
AT1G20510.1 11Arabidopsis thaliana0546698162 (16)C
AT5G38120.3 11Arabidopsis thaliana051771830 (0)C
Os03g04000.1 7Oryza sativa054857737 (7)_
Os01g67540.1 7Oryza sativa6E-14457642600 (0)C
Os03g05780.1 7Oryza sativa2E-13649445638 (8)C
Zm00001eb002570_P001 agpv5Zea mays054957710 (0)M
GRMZM2G096020_P01 3.21Zea mays054957710 (0)M
v1_GRMZM2G096020_P01 4a53Zea mays054957711 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AMP-binding(1) AMP-binding_C(1)
TargetP: Chloroplast (Class 4 C0.688; M0.179; S0.010; _0.323)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 550 aa (-cTP 493)
Molecular Weight 60.52 kDA(-cTP 54.09)
PI 8.47(-cTP 7.23)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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