PPDB

PPDB	The Plant Proteome Database

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AT1G20480.1 AMP-dependent synthetase and ligase family protein

Lab Annot.

Mapman: 16.2 secondary metabolism.phenylpropanoids

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20510.1 11 Arabidopsis thaliana 0 547 65 80 62 (16) C
AT1G20500.1 11 Arabidopsis thaliana 0 551 60 75 0 (0) C
AT1G20510.2 11 Arabidopsis thaliana 0 478 65 80 61 (15) C
Os03g04000.1 7 Oryza sativa 0 557 56 71 7 (7) _
Os01g67540.1 7 Oryza sativa 2E-149 583 43 60 0 (0) C
Os03g05780.1 7 Oryza sativa 8E-129 498 43 62 8 (8) C
Zm00001eb002570_P001 agpv5 Zea mays 0 551 57 71 0 (0) M
GRMZM2G096020_P01 3.21 Zea mays 0 551 57 71 0 (0) M
v1_GRMZM2G096020_P01 4a53 Zea mays 0 551 57 71 1 (1) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AMP-binding(1) AMP-binding_C(1)
TargetP:	Cytoplasm (Class 1 C0.084; M0.120; S0.022; _0.946)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	565 aa (-cTP 499)
Molecular Weight	61.44 kDA(-cTP )
PI	8.98(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data