PPDB

The Plant Proteome Database

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AT1G20410.1   Pseudouridine synthase family protein

Lab Annot. Pseudouridine synthase protein
Mapman: 29.1.30 protein.aa activation.pseudouridylate synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G20410.2 11Arabidopsis thaliana03511001000 (0)_
Os04g47380.1 7Oryza sativa1E-13837653690 (0)_
Zm00001eb074060_P004 agpv5Zea mays4E-16351348640 (0)_
v1_GRMZM2G101383_P01 4a53Zea mays4E-16351348640 (0)_
GRMZM2G101383_P01 3.21Zea mays4E-16351348640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 3 C0.168; M0.087; S0.026; _0.762)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 504 aa (-cTP 444)
Molecular Weight 56.55 kDA(-cTP )
PI 6.53(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help