PPDB

 The Plant Proteome Database

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AT1G20330.1   sterol methyltransferase 2
Lab Annot. SMT2 (STEROL METHYLTRANSFERASE 2)
Mapman: 17.3.1.2.2 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT
Curated Location
TAIR curated location: endoplasmic reticulum12215504
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G76090.1 11Arabidopsis thaliana035983934 (4)S
AT5G13710.1 11Arabidopsis thaliana4E-84330405728 (22)_
AT5G13710.2 11Arabidopsis thaliana4E-84330405728 (22)_
Os03g04340.1 7Oryza sativa0359708413 (13)_
Os07g10600.2 7Oryza sativa4E-84339405815 (15)_
Os07g10600.1 7Oryza sativa2E-83339405815 (15)C
v1_GRMZM2G126682_P01 4a53Zea mays0362718418 (18)_
GRMZM2G126682_P01 3.21Zea mays0362718416 (16)_
Zm00001eb002850_P001 agpv5Zea mays036070830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CMAS(1) FCD(1) FtsJ(1) Methyltransf_11(1) Methyltransf_12(1) Methyltransf_15(1)
TargetP: Secreted (Class 3 C0.030; M0.094; S0.787; _0.295)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 361 aa (-cTP 328)
Molecular Weight 40.45 kDA(-cTP )
PI 5.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1744Detail        [A. thaliana] Mep-6
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(ER-LOPIT-callus)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help