PPDB

PPDB	The Plant Proteome Database

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AT1G20300.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G77360.2 11 Arabidopsis thaliana 2E-66 405 31 56 0 (0) M
AT1G77360.1 11 Arabidopsis thaliana 9E-66 405 31 56 0 (0) M
AT1G71060.1 11 Arabidopsis thaliana 2E-63 421 30 53 0 (0) M
Os09g37070.1 7 Oryza sativa 1E-159 483 48 66 0 (0) M
Os03g55340.1 7 Oryza sativa 5E-70 442 32 54 0 (0) _
Os01g32090.1 7 Oryza sativa 2E-60 421 29 52 0 (0) M
v1_GRMZM2G108981_P01 4a53 Zea mays 6E-152 487 48 65 0 (0) _
v1_GRMZM2G108981_P02 4a53 Zea mays 6E-152 487 48 65 0 (0) _
Zm00001eb103960_P001 agpv5 Zea mays 6E-152 487 48 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(2) BTAD(2) DUF3368(3) DUF4854(1) DUF5321(1) ECSIT(3) Exog_C(2) MRP-S27(4) M
TargetP:	Mitochondria (Class 3 C0.075; M0.594; S0.059; _0.065)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	537 aa (-cTP 491)
Molecular Weight	61.21 kDA(-cTP )
PI	8.50(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data