PPDB

The Plant Proteome Database

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AT1G20190.1   expansin 11

Lab Annot. ATEXPA11 ( EXPANSIN A11)
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G20190.2 11Arabidopsis thaliana7E-1441931001000 (0)_
AT1G69530.2 11Arabidopsis thaliana7E-110240627618 (9)S
AT1G69530.1 11Arabidopsis thaliana7E-110240627618 (9)S
Os04g15840.1 7Oryza sativa6E-13124770820 (0)S
Os06g50400.1 7Oryza sativa5E-12824669810 (0)S
Os03g06000.1 7Oryza sativa4E-12322473850 (0)S
Zm00001eb419530_P001 agpv5Zea mays4E-13123274860 (0)S
GRMZM2G074585_P02 3.21Zea mays4E-13123274860 (0)S
v1_GRMZM2G074585_P01 4a53Zea mays4E-13123274860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(2) Expansin_C(1)
TargetP: Secreted (Class 1 C0.028; M0.053; S0.961; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 252 aa (-cTP 212)
Molecular Weight 26.76 kDA(-cTP )
PI 8.91(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2252Detail       seedlings [A. thaliana] total tissue gfs9
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
15815986(seedling)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help