PPDB

The Plant Proteome Database

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AT1G20180.1   transmembrane protein (DUF677)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G20180.2 11Arabidopsis thaliana039092920 (0)_
AT3G49070.1 11Arabidopsis thaliana3E-2538628460 (0)_
AT3G49070.2 11Arabidopsis thaliana4E-2536528460 (0)_
Os03g05440.1 7Oryza sativa3E-2637525440 (0)_
Os04g34590.1 7Oryza sativa2E-1530724400 (0)C
Os06g50410.1 7Oryza sativa7E-139743610 (0)_
v1_GRMZM2G150925_P01 4a53Zea mays4E-3439128470 (0)_
GRMZM2G150925_P01 3.21Zea mays4E-3439128470 (0)_
Zm00001eb003860_P002 agpv5Zea mays4E-3439128470 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BPS1(3) CREPT(2) DUF677(1) THP2(2)
TargetP: Cytoplasm (Class 5 C0.231; M0.328; S0.007; _0.383)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon:
TAT position:
Length 390 aa (-cTP 353)
Molecular Weight 44.07 kDA(-cTP )
PI 9.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help