PPDB

The Plant Proteome Database

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AT1G20140.1   SKP1-like 4

Lab Annot. SKP1-like 4
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP
Curated Location
TAIR curated location: nucleolus & nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G25700.1 11Arabidopsis thaliana9E-11016390940 (0)_
AT1G75950.1 11Arabidopsis thaliana4E-73161688348 (28)_
AT5G42190.1 11Arabidopsis thaliana4E-73170687911 (10)_
Os09g36830.1 7Oryza sativa3E-69171657617 (17)_
Os11g26910.1 7Oryza sativa1E-59167687856 (56)_
Os08g28820.1 7Oryza sativa1E-5916456730 (0)_
Zm00001eb229260_P001 agpv5Zea mays2E-6516266800 (0)_
v1_GRMZM2G074282_P06 4a53Zea mays2E-65162668010 (10)_
GRMZM2G074282_P04 3.21Zea mays2E-65162668015 (15)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Skp1(1) Skp1_POZ(1)
TargetP: Cytoplasm (Class 2 C0.099; M0.072; S0.229; _0.890)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 163 aa (-cTP 136)
Molecular Weight 18.19 kDA(-cTP )
PI 4.61(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


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