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PPDB	The Plant Proteome Database

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AT1G20110.1 RING/FYVE/PHD zinc finger superfamily protein

Lab Annot.

RING/FYVE/PHD zinc finger protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G14270.1 11 Arabidopsis thaliana 3E-11 80 36 51 2 (2) _
AT3G14270.2 11 Arabidopsis thaliana 3E-11 80 36 51 0 (0) _
AT1G61690.1 11 Arabidopsis thaliana 2E-10 59 45 61 0 (0) _
Os07g38580.1 7 Oryza sativa 2E-167 376 67 76 0 (0) _
Os06g50840.1 7 Oryza sativa 2E-164 374 65 77 0 (0) _
Os03g46710.1 7 Oryza sativa 7E-11 59 44 59 0 (0) _
Zm00001eb228270_P003 agpv5 Zea mays 2E-170 368 66 78 0 (0) _
GRMZM2G061156_P01 3.21 Zea mays 1E-169 629 48 58 1 (0) _
Zm00001eb325110_P002 agpv5 Zea mays 1E-169 629 48 58 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FYVE(2) FYVE_2(2) NMD3(1) PTB(1)
TargetP:	Cytoplasm (Class 3 C0.153; M0.246; S0.018; _0.790)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	601 aa (-cTP 555)
Molecular Weight	65.40 kDA(-cTP )
PI	6.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1581	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2296	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2301	Detail								[A. thaliana]		Clp C1 TRAP
2304	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
17216043(leaf)
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data