PPDB

PPDB	The Plant Proteome Database

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AT1G19940.1 glycosyl hydrolase 9B5

Lab Annot.

Mapman: 10.6.1 cell wall.degradation.cellulases and beta -1,4-glucanases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G19940.2 11 Arabidopsis thaliana 0 515 100 100 0 (0) S
AT1G19940.3 11 Arabidopsis thaliana 0 407 99 99 0 (0) S
AT1G75680.1 11 Arabidopsis thaliana 0 525 71 84 32 (32) S
Os09g36350.1 7 Oryza sativa 0 525 59 76 16 (16) S
Os06g50140.1 7 Oryza sativa 0 514 60 76 0 (0) S
Os09g36350.2 7 Oryza sativa 8E-140 363 57 74 8 (8) S
GRMZM2G153987_P01 3.21 Zea mays 0 467 61 77 0 (0) S
Zm00001eb228030_P002 agpv5 Zea mays 0 419 62 78 0 (0) S
GRMZM2G147422_P01 3.21 Zea mays 0 522 61 76 5 (5) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	EphA2_TM(1) Glyco_hydro_9(1) UL45(1)
TargetP:	Secreted (Class 1 C0.002; M0.158; S0.985; _0.024)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	515 aa (-cTP 513)
Molecular Weight	56.71 kDA(-cTP )
PI	5.51(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to siliques)
19546170(mature pollen grains)

Comparative Proteomics Data