PPDB

PPDB	The Plant Proteome Database

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AT1G19920.1 Pseudouridine synthase/archaeosine transglycosylase-like family protein

Lab Annot.

ATPsulfurylase-2 (APS2)
Mapman: 14.1 S-assimilation.APS

Curated Location

cytosol (Pubmed: 25601874 )
plastid (Pubmed: 25601874 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G22890.1 11 Arabidopsis thaliana 0 441 71 82 607 (303) C
AT5G43780.1 11 Arabidopsis thaliana 0 423 74 84 138 (103) C
AT4G14680.1 11 Arabidopsis thaliana 0 442 70 83 50 (32) C
Os03g53230.1 7 Oryza sativa 0 409 73 83 1 (1) C
Os04g02050.1 7 Oryza sativa 0 355 82 89 21 (21) _
Os04g02050.2 7 Oryza sativa 0 316 84 91 21 (21) _
v1_GRMZM2G158147_P01 4a53 Zea mays 0 411 80 89 77 (77) C
Zm00001eb089390_P002 agpv5 Zea mays 0 411 80 89 8 (8) C
Zm00001eb089390_P001 agpv5 Zea mays 0 411 80 89 8 (8) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP-sulfurylase(1) DUF4585(2) PUA_2(1)
TargetP:	Chloroplast (Class 2 C0.944; M0.164; S0.017; _0.013)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	476 aa (-cTP 420)
Molecular Weight	53.64 kDA(-cTP 47.24)
PI	6.15(-cTP 5.63)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
99	Detail								petal [B. oleracea]	plastid stroma
102	Detail								petal [B. oleracea]	plastid stroma	Alboglabra
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1461	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 1)
1462	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 2)
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1482	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 1)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1826	Detail								leaf tip mesophyll [Zea Mays]	chloroplast stroma	W22 (repl. 3)
1871	Detail								Total leaf [A. thaliana]	Stroma	wild-type
1872	Detail								Total leaf [A. thaliana]	Stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
2167	Detail								leaf [A. thaliana]	stroma Clp stroma	P3 trap-strepII
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2184	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2185	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2297	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

16055689(Glutathionylated suspension cell)
15815986(Silique)
19200160(flower-stage 12)
19546170(mature pollen grains)
17216043(leaf)
19888209(80S polysomal fraction)
19888209(leaves)
20706207(contaminants cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
19508356(mature pollen grains and pollen tubes)
22060019(phosphoproteome - N-starved seedlings)
21693672(wound-regulated leaf proteome (wt))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data