PPDB

The Plant Proteome Database

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AT1G19910.1   ATPase%2C F0/V0 complex%2C subunit C protein

Lab Annot. AVA-P2 (vacuolar-H+-pumping ATPase 16 kDa proteolipid subunit 2); ATPase
Mapman: 34.1.1 transport.p- and v-ATPases.H+-transporting two-sector ATPase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38920.1 11Arabidopsis thaliana9E-1111631001009 (9)S
AT4G34720.1 11Arabidopsis thaliana9E-1111631001009 (9)S
AT2G16510.1 11Arabidopsis thaliana9E-1111631001009 (9)S
Os02g34510.1 7Oryza sativa1E-10816497994 (4)S
Os12g07140.1 7Oryza sativa2E-10816596984 (4)_
Os11g06890.1 7Oryza sativa3E-10816595981 (1)S
v1_AC216067.3_FGP002 4a53Zea mays6E-10916596980 (0)S
Zm00001eb407840_P001 agpv5Zea mays6E-10916596980 (0)S
v1_GRMZM2G177005_P01 4a53Zea mays6E-10916596980 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATP-synt_C(2)
TargetP: Secreted (Class 2 C0.028; M0.039; S0.849; _0.183)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 3 TMs
TAT position:
Length 165 aa (-cTP 139)
Molecular Weight 16.64 kDA(-cTP )
PI 8.62(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

15215502(Vacuolar proteome)
17151019(vacuole - suspension cell)
17660356(tonoplast (Brassica oleracea buds))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
20061580(chloroplast envelope (inner+outer))
21826108(SYP trans-Golgi-filtered)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)

Comparative Proteomics Data


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