PPDB

 The Plant Proteome Database

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AT1G19880.1   Regulator of chromosome condensation (RCC1) family protein
Lab Annot. Regulator of chromosome condensation (RCC1) protein
Mapman: 31.2 cell.division
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G63860.1 11Arabidopsis thaliana7E-343632947122 (48)_
AT3G23270.1 11Arabidopsis thaliana3E-2338928420 (0)_
AT3G23270.2 11Arabidopsis thaliana3E-2338928420 (0)_
Os04g56720.1 7Oryza sativa052263778 (8)_
Os02g34860.1 7Oryza sativa4E-3228828480 (0)_
Os04g35570.1 7Oryza sativa3E-31391274425 (25)_
GRMZM5G866734_P01 3.21Zea mays0532637737 (37)_
Zm00001eb432950_P002 agpv5Zea mays053263770 (0)_
v1_GRMZM2G154939_P01 4a53Zea mays0532637710 (10)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: API5(1) CDC45(1) Coilin_N(1) DUF4213(2) RCC1(7) RCC1_2(6) SAPS(1) Vfa1(1)
TargetP: Cytoplasm (Class 2 C0.161; M0.034; S0.051; _0.930)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 538 aa (-cTP 467)
Molecular Weight 57.84 kDA(-cTP )
PI 7.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2240Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2257Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

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