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PPDB	The Plant Proteome Database

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AT1G19870.1 IQ-domain 32

Lab Annot.

calmodulin-binding family
Mapman: 30.3 signalling.calcium

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G19870.2 11 Arabidopsis thaliana 0 611 100 100 0 (0) _
AT1G74690.1 11 Arabidopsis thaliana 2E-22 206 33 52 33 (7) _
AT1G18840.3 11 Arabidopsis thaliana 6E-20 198 33 51 0 (0) _
Os04g56740.1 7 Oryza sativa 2E-65 929 30 46 23 (23) _
Os05g45930.2 7 Oryza sativa 1E-21 133 42 57 15 (15) C
Os05g45930.1 7 Oryza sativa 1E-21 133 42 57 15 (15) C
v1_GRMZM2G348909_P01 4a53 Zea mays 1E-33 388 31 46 5 (5) _
Zm00001eb067350_P001 agpv5 Zea mays 1E-33 388 31 46 0 (0) _
GRMZM2G348909_P01 3.21 Zea mays 1E-33 388 31 46 5 (5) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4005(4) IQ(3)
TargetP:	Chloroplast (Class 4 C0.656; M0.052; S0.008; _0.436)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	794 aa (-cTP 736)
Molecular Weight	86.88 kDA(-cTP 80.81)
PI	5.21(-cTP 5.07)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1576	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)
14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19253305(phosphoproteins (etiolated seedling))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
19114538(guard cells Arabidopsis leaf)
19995723(chloroplast reference proteome)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data