PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G19800.1   trigalactosyldiacylglycerol 1

Lab Annot. TGD1 - permease
Mapman: 11.15* lipid metabolism.transport
Curated Location envelope-inner-integral (Pubmed: 23198870 16199613 18431481 )

TAIR curated location: chloroplast outer membrane & chloroplast envelope & chloroplast inner membrane16199613,12743031
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G19800.5 11Arabidopsis thaliana03501001000 (0)_
AT1G19800.4 11Arabidopsis thaliana03501001000 (0)_
AT1G19800.6 11Arabidopsis thaliana03501001000 (0)_
v1_GRMZM2G170516_P01 4a53Zea mays5E-13625872876 (6)M
Zm00001eb074560_P001 agpv5Zea mays5E-13625872870 (0)M
GRMZM2G170516_P01 3.21Zea mays5E-13625872877 (7)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MlaE(1)
TargetP: Cytoplasm (Class 5 C0.231; M0.117; S0.037; _0.395)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 5 TMs
TAT position:
Length 350 aa (-cTP 283)
Molecular Weight 37.91 kDA(-cTP )
PI 9.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1621Detail        [A. thaliana] m48
1933Detail       leaf [A. thaliana] chloroplast wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
21311031(mitochondria)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help