PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G19780.1 cyclic nucleotide gated channel 8

Lab Annot.

Mapman: 34.22 transport.cyclic nucleotide or calcium regulated channels

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G15990.1 11 Arabidopsis thaliana 0 751 87 92 0 (0) _
AT1G19780.2 11 Arabidopsis thaliana 0 541 100 100 0 (0) _
AT4G30560.4 11 Arabidopsis thaliana 0 752 68 78 0 (0) _
Os04g55080.1 7 Oryza sativa 0 752 60 73 0 (0) C
Os03g44440.1 7 Oryza sativa 0 722 61 74 0 (0) _
Os12g28260.1 7 Oryza sativa 0 762 59 73 0 (0) _
Zm00001eb068710_P002 agpv5 Zea mays 0 754 60 73 0 (0) _
Zm00001eb068710_P005 agpv5 Zea mays 0 754 60 73 0 (0) _
Zm00001eb068710_P003 agpv5 Zea mays 0 754 60 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	cNMP_binding(1) Ion_trans(1) IQ(1)
TargetP:	Cytoplasm (Class 5 C0.212; M0.327; S0.010; _0.466)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	5 TMs
Aramemnon:	4 TMs
TAT position:
Length	753 aa (-cTP 706)
Molecular Weight	85.98 kDA(-cTP )
PI	9.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data