PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G19690.1   NAD(P)-binding Rossmann-fold superfamily protein

Lab Annot. catalytic/ coenzyme binding
Mapman: 35.2 not assigned.unknown
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g15660.1 7Oryza sativa2E-10231349660 (0)M
Os01g15660.2 7Oryza sativa4E-3414844650 (0)_
Os01g15660.3 7Oryza sativa4E-3414844650 (0)_
v1_GRMZM2G119749_P01 4a53Zea mays3E-9730050670 (0)M
GRMZM2G119749_P01 3.21Zea mays3E-9730050670 (0)M
Zm00001eb128420_P001 agpv5Zea mays3E-9730050670 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 3Beta_HSD(1) ApbA(1) Epimerase(2) GDP_Man_Dehyd(2)
TargetP: Chloroplast (Class 2 C0.831; M0.062; S0.060; _0.111)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 352 aa (-cTP 316)
Molecular Weight 39.75 kDA(-cTP 35.45)
PI 8.68(-cTP 6.47)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
869Detail       leaf [A. thaliana] chloroplast stromawild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
1292Detail       leaf [A. thaliana] co-IP cGEP (rep. 1) stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
22060019(phosphoproteome - N-starved seedlings)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help