PPDB

PPDB	The Plant Proteome Database

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AT1G19680.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G75400.1 11 Arabidopsis thaliana 2E-174 470 62 71 0 (0) C
AT2G21500.1 11 Arabidopsis thaliana 7E-43 433 34 49 0 (0) _
AT2G21500.2 11 Arabidopsis thaliana 7E-43 433 34 49 0 (0) _
Os01g15630.2 7 Oryza sativa 1E-64 442 38 53 0 (0) C
Os01g15630.1 7 Oryza sativa 1E-63 443 38 53 0 (0) C
Os10g26610.1 7 Oryza sativa 1E-10 64 46 60 0 (0) C
v1_GRMZM2G064580_P02 4a53 Zea mays 2E-64 450 36 50 0 (0) C
v1_GRMZM2G064580_P04 4a53 Zea mays 2E-64 450 36 50 0 (0) C
v1_GRMZM2G064580_P01 4a53 Zea mays 2E-64 450 36 50 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PHD(1) Prok-RING_4(2) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(2) zf-C
TargetP:	Chloroplast (Class 4 C0.585; M0.060; S0.022; _0.340)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	444 aa (-cTP 421)
Molecular Weight	47.97 kDA(-cTP 45.70)
PI	9.24(-cTP 9.33)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data