PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G19580.1   gamma carbonic anhydrase 1

Lab Annot. gamma carbonic anhydrase 1
Mapman: 9.1.1.5 mitochondrial electron transport / ATP synthesis.NADH-DH.carbonic anhydrase
Curated Location
TAIR curated location: mitochondrial membrane & NADH dehydrogenase complex (ubiquinone)16407270
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47260.1 11Arabidopsis thaliana3E-1582647889136 (135)M
AT5G66510.1 11Arabidopsis thaliana1E-148262768669 (63)M
AT5G66510.2 11Arabidopsis thaliana3E-145273738360 (54)M
Os01g18070.1 7Oryza sativa8E-157256798832 (32)M
Os12g07220.1 7Oryza sativa1E-153269768629 (29)M
Os07g44840.1 7Oryza sativa9E-14826973853 (3)M
GRMZM2G140885_P01 3.21Zea mays6E-15826079897 (7)M
v1_GRMZM2G140885_P01 4a53Zea mays6E-15826079897 (5)M
Zm00001eb332510_P002 agpv5Zea mays6E-15826079890 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4954(1) Hexapep(4) Hexapep_2(4)
TargetP: Mitochondria (Class 2 C0.038; M0.870; S0.011; _0.165)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 275 aa (-cTP 247)
Molecular Weight 29.97 kDA(-cTP )
PI 7.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1617Detail        [A. thaliana] m48
1744Detail        [A. thaliana] Mep-6
2269Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)
17660356(tonoplast (Brassica oleracea buds))
19546170(mature pollen grains)
20118269(developing seeds)
20197505(mitochondria Complex I (leaf))
17216043(leaf)
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help