PPDB

PPDB	The Plant Proteome Database

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AT1G19310.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G23780.2 11 Arabidopsis thaliana 7E-72 216 54 67 0 (0) _
AT2G23780.3 11 Arabidopsis thaliana 7E-72 216 54 67 0 (0) _
AT2G23780.1 11 Arabidopsis thaliana 7E-72 216 54 67 0 (0) _
Os12g43930.1 7 Oryza sativa 2E-70 214 54 67 0 (0) _
Os01g56070.1 7 Oryza sativa 4E-66 185 58 73 0 (0) _
Os01g56070.4 7 Oryza sativa 4E-66 185 58 73 0 (0) _
GRMZM2G027131_P01 3.21 Zea mays 5E-71 181 59 74 0 (0) C
Zm00001eb370210_P001 agpv5 Zea mays 5E-71 181 59 74 0 (0) C
v1_GRMZM2G027131_P01 4a53 Zea mays 5E-71 181 59 74 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	12TM_1(1) Baculo_IE-1(1) IBR(2) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC
TargetP:	Cytoplasm (Class 2 C0.264; M0.035; S0.035; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	2 TMs
TAT position:
Length	226 aa (-cTP 220)
Molecular Weight	24.52 kDA(-cTP )
PI	6.77(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data