PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G18970.1   germin-like protein 4
Lab Annot.
Mapman: 20.2.99 stress.abiotic.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G18980.1 11Arabidopsis thaliana7E-13622084911 (1)S
AT1G74820.1 11Arabidopsis thaliana5E-7921455690 (0)S
AT1G09560.1 11Arabidopsis thaliana5E-69196557016 (15)S
Os03g48780.1 7Oryza sativa2E-6919954690 (0)S
Os03g48770.1 7Oryza sativa2E-6919954690 (0)S
Os05g19670.1 7Oryza sativa2E-6919651700 (0)S
GRMZM2G122018_P01 3.21Zea mays3E-7121652660 (0)S
v1_GRMZM2G122018_P01 4a53Zea mays3E-7121652660 (0)S
Zm00001eb053700_P001 agpv5Zea mays3E-7121652660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cupin_1(1) Cupin_2(1)
TargetP: Secreted (Class 1 C0.012; M0.025; S0.932; _0.031)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 220 aa (-cTP 144)
Molecular Weight 23.21 kDA(-cTP )
PI 6.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to roots)
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help