PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G18840.1   IQ-domain 30

Lab Annot. IQ-domain 30
Mapman: 30.3 signalling.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G18840.3 11Arabidopsis thaliana05721001000 (0)_
AT1G18840.2 11Arabidopsis thaliana05721001000 (0)_
AT1G74690.1 11Arabidopsis thaliana0608627312 (9)_
Os05g45930.1 7Oryza sativa1E-75627365215 (15)C
Os05g45930.2 7Oryza sativa2E-63579365115 (15)C
Os01g51840.1 7Oryza sativa3E-5760534492 (2)C
Zm00001eb356480_P001 agpv5Zea mays6E-7562737530 (0)C
Zm00001eb356480_P002 agpv5Zea mays6E-7562737530 (0)C
GRMZM2G100229_P01 3.21Zea mays6E-7562737534 (4)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4005(2) IQ(3) JmjC(1)
TargetP: Cytoplasm (Class 5 C0.102; M0.400; S0.042; _0.404)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 572 aa (-cTP 541)
Molecular Weight 62.73 kDA(-cTP )
PI 9.17(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19508356(mature pollen grains and pollen tubes)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help