PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G18780.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G29840.1 11 Arabidopsis thaliana 1E-76 238 55 63 0 (0) _
AT3G13228.1 11 Arabidopsis thaliana 9E-34 337 32 46 0 (0) _
AT1G18760.1 11 Arabidopsis thaliana 8E-33 94 58 72 0 (0) _
Os11g04680.1 7 Oryza sativa 3E-10 76 36 50 0 (0) _
Os12g04660.1 7 Oryza sativa 8E-10 48 43 62 0 (0) _
Os12g04590.1 7 Oryza sativa 8E-10 48 43 62 0 (0) _
Zm00001eb257960_P004 agpv5 Zea mays 5E-11 153 34 47 0 (0) C
Zm00001eb257960_P001 agpv5 Zea mays 7E-11 153 34 47 0 (0) M
Zm00001eb257960_P002 agpv5 Zea mays 2E-10 66 50 63 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C3HC4_4(
TargetP:	Secreted (Class 4 C0.015; M0.134; S0.711; _0.340)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	325 aa (-cTP 300)
Molecular Weight	36.92 kDA(-cTP )
PI	4.43(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data