PPDB

 The Plant Proteome Database

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AT1G18630.1   glycine-rich RNA-binding protein 6
Lab Annot. glycine-rich RNA binding protein 6 (GR-RBP6/GRP6)
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G74230.1 11Arabidopsis thaliana4E-241104869134 (109)M
AT3G23830.1 11Arabidopsis thaliana1E-2211347657 (1)M
AT3G23830.2 11Arabidopsis thaliana1E-2211347657 (1)M
Os12g31800.1 7Oryza sativa3E-23110436923 (23)M
Os10g17454.3 7Oryza sativa6E-2110941631 (1)M
Os01g68790.2 7Oryza sativa6E-2081547421 (21)C
Zm00001eb326870_P003 agpv5Zea mays8E-2511048650 (0)M
GRMZM2G131167_P03 3.21Zea mays8E-2511048650 (0)M
GRMZM2G131167_P01 3.21Zea mays8E-2511048650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GRP(1) Nup35_RRM(2) RRM_1(1) RRM_7(1)
TargetP: Mitochondria (Class 1 C0.055; M0.860; S0.017; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 155 aa (-cTP 137)
Molecular Weight 15.96 kDA(-cTP )
PI 9.89(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 21311031(mitochondria)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help