PPDB

PPDB	The Plant Proteome Database

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AT1G18485.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G57430.1 11 Arabidopsis thaliana 0 857 36 57 0 (0) C
AT1G16480.1 11 Arabidopsis thaliana 0 869 35 56 0 (0) M
AT1G16480.2 11 Arabidopsis thaliana 6E-179 866 35 56 0 (0) _
Os04g39410.1 7 Oryza sativa 0 931 35 55 0 (0) M
Os01g10800.1 7 Oryza sativa 1E-169 857 35 54 2 (2) C
Os04g14130.3 7 Oryza sativa 1E-169 867 34 52 0 (0) _
AC203841.3_FGP002 3.21 Zea mays 0 979 34 53 0 (0) C
Zm00001eb424590_P001 agpv5 Zea mays 0 979 34 53 0 (0) C
v1_AC203841.3_FGP002 4a53 Zea mays 0 979 34 53 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(1) PPR(17) PPR_1(12) PPR_2(12) PPR_3(8) PPR_long(1)
TargetP:	Chloroplast (Class 4 C0.714; M0.320; S0.012; _0.023)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	970 aa (-cTP 933)
Molecular Weight	108.81 kDA(-cTP 104.55)
PI	6.22(-cTP 6.06)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
542	Detail								leaf [A. thaliana]	stroma (FPLC) >500 kDa (HMB)	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data