PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G18470.1 Transmembrane Fragile-X-F-associated protein

Lab Annot.

Transmembrane Fragile-X-F-associated protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G73950.1 11 Arabidopsis thaliana 0 467 83 91 0 (0) S
AT1G18470.2 11 Arabidopsis thaliana 0 389 100 100 0 (0) S
AT1G73950.2 11 Arabidopsis thaliana 0 467 77 85 0 (0) S
Os03g49900.1 7 Oryza sativa 0 462 68 81 0 (0) M
Os10g36880.1 7 Oryza sativa 2E-07 44 50 68 0 (0) C
GRMZM2G704032_P03 3.21 Zea mays 0 470 66 80 0 (0) M
v1_GRMZM2G704032_P03 4a53 Zea mays 0 470 66 80 0 (0) M
Zm00001eb216620_P001 agpv5 Zea mays 0 398 69 82 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2039(1) Prok-RING_4(1) Tmemb_185A(1) zf-C3HC4_3(1) zf-RING_2(1) zf-RING_5(1)
TargetP:	Secreted (Class 4 C0.005; M0.160; S0.523; _0.035)
Predotar:
Subcel. Location:
TM-HMM prediction:	7 TMs
Aramemnon:	7 TMs
TAT position:
Length	467 aa (-cTP 395)
Molecular Weight	53.00 kDA(-cTP )
PI	6.54(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data