PPDB

 The Plant Proteome Database

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AT1G18450.1   actin-related protein 4
Lab Annot. actin-related protein 4 (ARP4)
Mapman: 31.1 cell.organisation
Curated Location
TAIR curated location: nucleus12609034
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12110.1 11Arabidopsis thaliana3E-954433755139 (92)_
AT3G53750.1 11Arabidopsis thaliana3E-954433756198 (95)_
AT3G53750.2 11Arabidopsis thaliana3E-9544337560 (0)_
Os08g04280.2 7Oryza sativa044569867 (7)_
Os08g04280.1 7Oryza sativa041166857 (7)_
Os03g61970.1 7Oryza sativa4E-97443385519 (19)_
Zm00001eb000800_P002 agpv5Zea mays044669860 (0)_
Zm00001eb000800_P001 agpv5Zea mays044669860 (0)_
GRMZM2G015384_P01 3.21Zea mays0446698623 (15)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Actin(1) FtsA(2) MreB_Mbl(2) Ppx-GppA(1)
TargetP: Cytoplasm (Class 2 C0.058; M0.124; S0.221; _0.873)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 441 aa (-cTP 421)
Molecular Weight 48.94 kDA(-cTP )
PI 5.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
135Detail       leaf [A. thaliana] plastid thylakoid membranewild-type
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1507Detail        [A. thaliana] wild-type
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1542Detail       leaf [A. thaliana] wild-type
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
1826Detail       leaf tip mesophyll [Zea Mays] chloroplast stromaW22 (repl. 3)
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2311Detail       leaf [A. thaliana] PG plastoglobule 
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 15496452(nucleolus)
19200160(flower-stage 12)
19546170(mature pollen grains)
17216043(leaf)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
20813957(SUMO proteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help