PPDB

 The Plant Proteome Database

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AT1G18250.1   Pathogenesis-related thaumatin superfamily protein
Lab Annot. thaumatin-like protein
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G18250.2 11Arabidopsis thaliana1E-18024499998 (1)S
AT1G73620.1 11Arabidopsis thaliana3E-14822587945 (5)_
AT1G75030.1 11Arabidopsis thaliana1E-8624552630 (0)S
Os06g47600.1 7Oryza sativa4E-11224166770 (0)S
Os04g59370.1 7Oryza sativa3E-7722553630 (0)S
Os10g05660.1 7Oryza sativa2E-7524949640 (0)S
v1_GRMZM2G476523_P01 4a53Zea mays6E-11125163760 (0)S
Zm00001eb226040_P001 agpv5Zea mays6E-11125163760 (0)S
GRMZM2G476523_P01 3.21Zea mays6E-11125163760 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Thaumatin(1)
TargetP: Secreted (Class 1 C0.108; M0.008; S0.919; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 243 aa (-cTP 146)
Molecular Weight 25.91 kDA(-cTP )
PI 8.84(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2291Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19200160(flower-stage 12)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help