PPDB

PPDB	The Plant Proteome Database

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AT1G17970.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G17970.2 11 Arabidopsis thaliana 0 247 99 100 0 (0) M
AT1G73760.1 11 Arabidopsis thaliana 1E-113 380 54 66 0 (0) C
AT1G73760.2 11 Arabidopsis thaliana 9E-65 291 50 63 0 (0) C
Os01g49770.2 7 Oryza sativa 6E-41 127 51 74 0 (0) S
Os01g49770.1 7 Oryza sativa 5E-40 125 53 74 0 (0) M
Os05g47670.1 7 Oryza sativa 2E-35 121 53 68 0 (0) _
Zm00001eb156060_P001 agpv5 Zea mays 4E-45 323 35 52 0 (0) C
Zm00001eb156060_P002 agpv5 Zea mays 2E-42 124 57 76 0 (0) C
GRMZM2G122223_P01 3.21 Zea mays 2E-42 124 57 76 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AP3D1(1) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) Rtf2(3) SR-25(
TargetP:	Mitochondria (Class 3 C0.264; M0.717; S0.002; _0.113)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	368 aa (-cTP 287)
Molecular Weight	41.62 kDA(-cTP )
PI	9.33(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data