PPDB

The Plant Proteome Database

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AT1G17790.1   DNA-binding bromodomain-containing protein

Lab Annot.
Mapman: 27.3.52 RNA.regulation of transcription.Global transcription factor group
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G73150.1 11Arabidopsis thaliana045563730 (0)C
AT1G73150.2 11Arabidopsis thaliana044363740 (0)C
AT1G06230.2 11Arabidopsis thaliana2E-6931044592 (2)_
Os01g11580.1 7Oryza sativa2E-6538741520 (0)_
Os04g53170.1 7Oryza sativa1E-4145030442 (2)M
Os04g53130.1 7Oryza sativa9E-4031036480 (0)_
v1_GRMZM2G400907_P01 4a53Zea mays3E-7838742531 (1)C
Zm00001eb119980_P001 agpv5Zea mays3E-7838742530 (0)C
GRMZM2G400907_P01 3.21Zea mays3E-7838742530 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BET(1) Bromodomain(1)
TargetP: Chloroplast (Class 2 C0.969; M0.043; S0.006; _0.188)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 487 aa (-cTP 455)
Molecular Weight 53.45 kDA(-cTP 50.06)
PI 6.23(-cTP 5.64)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1294Detail       leaf [A. thaliana] co-IP cGEP (rep. 2) stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)

Comparative Proteomics Data


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