PPDB

The Plant Proteome Database

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AT1G17640.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17640.2 11Arabidopsis thaliana03691001000 (0)_
AT1G17640.3 11Arabidopsis thaliana03691001000 (0)_
AT3G13224.2 11Arabidopsis thaliana1E-6519951732 (1)_
Os02g12850.1 7Oryza sativa1E-71179627911 (11)_
Os08g23120.1 7Oryza sativa7E-6124545624 (4)_
Os08g38410.3 7Oryza sativa3E-5422043640 (0)_
Zm00001eb240020_P004 agpv5Zea mays8E-7517962810 (0)_
Zm00001eb240020_P002 agpv5Zea mays9E-7517762810 (0)_
v1_GRMZM2G139643_P03 4a53Zea mays1E-74180628123 (23)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NID(1) OB_RNB(2) PHM7_cyt(3) RRM_1(2) RRM_7(2)
TargetP: Cytoplasm (Class 2 C0.151; M0.090; S0.041; _0.928)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 369 aa (-cTP 291)
Molecular Weight 40.20 kDA(-cTP )
PI 5.57(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help