PPDB

PPDB	The Plant Proteome Database

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AT1G17630.1 Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G17630.2 11 Arabidopsis thaliana 0 731 100 100 0 (0) M
AT1G20230.1 11 Arabidopsis thaliana 2E-123 663 32 53 0 (0) _
AT5G16860.1 11 Arabidopsis thaliana 3E-116 693 33 51 0 (0) _
Os01g10090.1 7 Oryza sativa 1E-144 560 40 59 0 (0) M
Os04g14130.3 7 Oryza sativa 2E-117 663 35 51 0 (0) _
Os04g14130.2 7 Oryza sativa 2E-117 663 35 51 0 (0) _
AC209718.1_FGP009 3.21 Zea mays 7E-142 591 39 58 0 (0) M
Zm00001eb120840_P001 agpv5 Zea mays 7E-142 591 39 58 0 (0) M
v1_AC209718.1_FGP009 4a53 Zea mays 7E-142 591 39 58 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(2) DYW_deaminase(1) PPR(13) PPR_1(11) PPR_2(10) PPR_3(10) PPR_long(3) TPR
TargetP:	Mitochondria (Class 2 C0.007; M0.720; S0.027; _0.102)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	731 aa (-cTP 691)
Molecular Weight	82.27 kDA(-cTP )
PI	7.06(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19888209(80S polysomal fraction)

Comparative Proteomics Data