PPDB

PPDB	The Plant Proteome Database

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AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G11890.1 11 Arabidopsis thaliana 6E-38 290 35 52 0 (0) C
AT2G27080.2 11 Arabidopsis thaliana 3E-21 241 27 46 0 (0) _
AT2G27080.1 11 Arabidopsis thaliana 3E-21 241 27 46 0 (0) _
Os01g39290.1 7 Oryza sativa 3E-27 230 28 48 0 (0) _
Os05g11010.1 7 Oryza sativa 1E-24 275 36 49 0 (0) _
Os01g09880.1 7 Oryza sativa 3E-19 153 34 56 2 (2) _
GRMZM2G118951_P01 3.21 Zea mays 3E-48 301 38 53 0 (0) _
v1_GRMZM2G118951_P01 4a53 Zea mays 3E-48 301 38 53 0 (0) _
GRMZM2G096655_P01 3.21 Zea mays 1E-30 191 32 54 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arch_flagellin(1) LEA_2(1)
TargetP:	Cytoplasm (Class 1 C0.058; M0.071; S0.003; _0.943)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	264 aa (-cTP 219)
Molecular Weight	28.29 kDA(-cTP )
PI	10.05(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)

Comparative Proteomics Data