PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G17580.1   myosin 1
Lab Annot. myosin 1
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20490.2 11Arabidopsis thaliana01531718438 (33)_
AT5G20490.1 11Arabidopsis thaliana01529718439 (34)_
AT5G20490.3 11Arabidopsis thaliana0146572840 (0)_
Os03g48140.1 7Oryza sativa0153070833 (3)_
Os06g29350.1 7Oryza sativa0152467822 (2)_
Os03g53660.1 7Oryza sativa0149159750 (0)_
Zm00001eb160490_P001 agpv5Zea mays0153570830 (0)_
AC155377.1_FGP001 3.21Zea mays0153570834 (4)_
v1_GRMZM2G435294_P01 4a53Zea mays0152366814 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_16(1) AAA_18(1) AAA_22(1) DIL(1) DUF1664(2) EspA_EspE(2) Flp1_like(2) Hpr_ki
TargetP: Cytoplasm (Class 4 C0.074; M0.056; S0.382; _0.765)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1520 aa (-cTP 1512)
Molecular Weight 172.91 kDA(-cTP )
PI 8.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2251Detail       seedlings [A. thaliana] total tissue wild-type
2255Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help