PPDB

The Plant Proteome Database

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AT1G17490.1   epidermal patterning factor-like protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72690.1 11Arabidopsis thaliana2E-168749600 (0)_
AT5G57000.2 11Arabidopsis thaliana6E-106844610 (0)_
AT5G57000.1 11Arabidopsis thaliana2E-096844610 (0)_
Os09g19910.1 7Oryza sativa2E-116353630 (0)_
Zm00001eb310990_P001 agpv5Zea mays4E-116352580 (0)_
GRMZM2G082019_P01 3.21Zea mays4E-116352580 (0)_
v1_GRMZM2G082019_P01 4a53Zea mays4E-116352580 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 3 C0.316; M0.079; S0.147; _0.767)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 77 aa (-cTP 72)
Molecular Weight 8.55 kDA(-cTP )
PI 5.16(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2043Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help